Genome-Wide Identification and Characterization of the Abiotic-Stress-Responsive LACS Gene Family in Soybean (Glycine max)
نویسندگان
چکیده
Long-chain acyl-CoA synthases (LACSs) are a key factor in the formation of after fatty acid hydrolysis and play an important role plant stress resistance. This gene family has not been research soybeans. In this study, soybean (Glycine max (L.) Merr.) whole genome was identified, LACS genes were screened, bioinformatics, tissue expression, abiotic stress, drought co-expression transcription factors analyzed to preliminarily clarify function soybean. A total 17 screened from sequencing data. bioinformatics analysis GmLACS carried out aspects phylogeny, structure, conserved sequence promoter homeopathic element. The spectra GmLACSs different organs stresses used by qRT-PCR. genes, which co-expresses significant response factors. results showed that all have highly AMP-binding domains, divided into 6 subfamilies. Transcriptome indicated gene-encoding expression profiles under alkali, low temperature, stress. GmLACS9/15/17 significantly upregulated temperature Co-expression there close correlation between responded These provide theoretical empirical basis for clarifying mechanism
منابع مشابه
Genome-Wide Analysis and Expression Profiling of the Phospholipase C Gene Family in Soybean (Glycine max)
Phosphatidylinositol-specific phospholipase C (PI-PLC) hydrolyses phosphatidylinositol-4,5-bisphosphate to produce diacylglycerol and inositol 1,4,5-trisphosphate. It plays an important role in plant development and abiotic stress responses. However, systematic analysis and expression profiling of the phospholipase C (PLC) gene family in soybean have not been reported. In this study, 12 putativ...
متن کاملGenome-Wide Identification and Expression Analysis of NRAMP Family Genes in Soybean (Glycine Max L.)
The NRAMP (natural resistance-associated macrophage protein) family of genes has been widely characterized in organisms ranging from bacteria to yeast, plants, mice, and humans. This gene family plays vital roles in divalent metal ion transport across cellular membranes. As yet, comprehensive analysis of NRAMP family genes has not been reported for soybean. In this study, bioinformatics analysi...
متن کاملGenome-Wide Identification, Classification, and Expression Analysis of Amino Acid Transporter Gene Family in Glycine Max
Amino acid transporters (AATs) play important roles in transporting amino acid across cellular membranes and are essential for plant growth and development. To date, the AAT gene family in soybean (Glycine max L.) has not been characterized. In this study, we identified 189 AAT genes from the entire soybean genomic sequence, and classified them into 12 distinct subfamilies based upon their sequ...
متن کاملBioinformatics Genome-Wide Characterization of the WRKY Gene Family in Sorghum bicolor
The WRKY gene family encodes a large group of transcription factors that regulate genes involved in plant response to biotic and abiotic stresses. Sorghum is a notable grain and forage crop in semi-arid regions because of its unusual tolerance against hot and dry environments. We identified a set of 85 WRKY genes in the S. bicolor genome and classified them into three groups (I–III). Among the ...
متن کاملGenome-Wide Sequence Characterization and Expression Analysis of Major Intrinsic Proteins in Soybean (Glycine max L.)
Water is essential for all living organisms. Aquaporin proteins are the major facilitator of water transport activity through cell membranes of plants including soybean. These proteins are diverse in plants and belong to a large major intrinsic (MIP) protein family. In higher plants, MIPs are classified into five subfamilies including plasma membrane intrinsic proteins (PIP), tonoplast intrinsi...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Agronomy
سال: 2022
ISSN: ['2156-3276', '0065-4663']
DOI: https://doi.org/10.3390/agronomy12071496